Technologies / Application Certified Platforms / AMBER Certified MD Systems

AMBER CERTIFIED MD SYSTEMS



Exxact AMBER Certified GPU Accelerated Systems



As the sole provider of AMBER Certified MD Systems, Exxact develops turnkey solutions in collaboration with key AMBER developers to provide value-added systems for GPU accelerated biomolecular simulations.

AMBER CERTIFIED

Exxact is the sole provider of AMBER Certified GPU Systems for high performance biomolecular simulation.



FULLY CUSTOMIZABLE

A wide range of options available from workstations to clusters to meet any budget, starting at $4,999.



PLUG AND PLAY

Exxact systems are fully turnkey, built to perform right out of the box with AMBER GPU computing solutions preinstalled.



HIGH PERFORMANCE

Systems designed to meet the demanding requirements for atomistic molecular dynamics simulations.



PRECONFIGURED

With example job submission scripts, benchmarks, a fully validated test suite,and the latest software patches for quick implementation.



DO MORE SCIENCE!

Have peace of mind, focus on what matters most, knowing your system is backed by a 3 year warranty and support.



Working closely with Exxact to develop certified AMBER GPU systems has been a pleasure. Their flexibility and responsiveness has allowed us to jointly optimize these computing platforms that, I believe, deliver transformative increases in performance for molecular dynamics simulation to every lab without the complexities of needing to validate the GPU computing hardware.


Ross Walker, AMBER Principal Developer

San Diego Supercomputer Center, UC San Diego

Suggested Amber MD Systems



Entry-Level

Valence Workstation

1x Intel Core i9-7900X
2x NVIDIA RTX 2080 Ti, RTX 2080 or GTX 1080 Ti
4x 8GB Memory
1x 512GB SSD



STARTING AT

$4,999
START YOUR ORDERMore Specs


Mid-Range

Tensor Workstation

2x Intel Xeon Gold 5118
4x NVIDIA RTX 2080 Ti, RTX 2080 or GTX 1080 Ti
12x 8GB Memory
1x 512GB SSD (OS)

1x 4TB HDD (Data)

STARTING AT

$9,999
START YOUR ORDERMore Specs


High-End

Tensor Workstation

2x Intel Xeon Gold 5120
4x NVIDIA RTX 2080 Ti, RTX 2080 or GTX 1080 Ti
12x 16GB Memory
1x 512GB SSD (OS)

1x 4TB HDD (Data)

STARTING AT

$11,999
START YOUR ORDERMore Specs

DHFR NVE HMR 4fs on Exxact Tensor Hardware

Dihydrofolate Reductase Hydrogen Mass Repartitioning - 4 Femtoseconds

AMBER 18 Available in Exxact Systems



The AMBER 18 package builds on AmberTools18 by adding the pmemd program, which resembles the sander (molecular dynamics) code in AmberTools, but provides better performance on multiple CPUs, and dramatic speed improvements on GPUs.





Major New Features Include



  • Free energy calculations on GPUs
  • GPU support for 12-6-4 ion potentials
  • Domain decomposition for CPU-parallelism
  • Nudged elastic band calculations for pmemd (CPU and partial GPU implementation)
  • Constant redox potential calculations, to supplement constant pH simulations
  • Support and significant performance improvements for the latest Maxwell, Pascal and Volta GPUs from NVIDIA.
  • New pmemd.gem code for advanced force fields, including AMOEBA

Exxact AMBER Certified GPU Systems



AMBER MD is currently one of the top, widley used HPC software solutions. The main driving force behind the AMBER GPU development has been to bring supercomputer power and performance to individual desktops with an economical price, high power efficiency and designed to benefit the widest range of researchers. Exxact has teamed up with the AMBER development team to design a series of AMBER GPU computing solutions that provide the optimum price performance for AMBER users.



All Exxact AMBER MD systems come preinstalled with the latest version and updates. Each system is fully turnkey and are ready to run out of the box and provide guaranteed performance. Our AMBER HPC systems provide solutions for scientists to acquire optimal workstations and clusters for running GPU AMBER (and regular CPU AMBER simulations as well).





Exxact offers SBGrid as an additional software option for all our structural biology solutions. Note, however, the end user must activate and obtain the license. The SBGrid team installs and maintains a collection of 270+ structural biology applications on Linux and OS X computers in your laboratory (including laptops). Members access a complete execution environment that includes the suite of structural biology applications preconfigured to run without any additional settings. Applications can be invoked from the shell prompt; there is no need to set up additional variables, change your path environment, or install supporting applications.



Contact us to learn more about utilizing SBGrid for your structural biology applications.

Exxact Tensor TS2-673917-AMB 2U 2x Intel Xeon processor server - AMBER Certified MD system
MPN: TS2-673917-AMB
  • Rack Height: 2U
  • Processor Supported: 2x Intel Xeon Scalable Family
  • Drive Bays: 8x 3.5" Hot-Swap (2x NVMe)
  • Supports up to 4x Double-Wide cards
Contact sales for pricing
Exxact Tensor TS4-1598415-AMB 4U 2x Intel Xeon Scalable family - AMBER Certified MD System
MPN: TS4-1598415-AMB
  • Rack Height: 4U
  • Processor Supported: 2x Intel Scalable Family
  • Drive Bays: 14x 2.5" Hot-Swap
  • Supports up to 8x Double-Wide cards
Contact sales for pricing
Exxact Tensor TS4-1686564-AMB 4U 2x Intel Xeon processor server - AMBER Certified MD system
MPN: TS4-1686564-AMB
  • Form Factor: 4U Rackmountable / Tower
  • Processor: 2x Intel Xeon Scalable family
  • Drive Bays: 4x 3.5"/2.5" Hot-Swap
  • Up to 5x Double-Wide cards
Contact sales for pricing
Exxact Tensor TS4-1709194-AMB 4U 2x Intel Xeon processor server - AMBER Certified MD system
MPN: TS4-1709194-AMB
  • Rack Height: 4U
  • Processor: 2x Intel Xeon Scalable family
  • Drive Bays: 14x 2.5" Hot-Swap
  • Up to 10x Double-Wide cards
Contact sales for pricing
Exxact Tensor TS4-264546-AMB 4U 2x Intel Xeon processor server - AMBER Certified MD System
MPN: TS4-264546-AMB
  • Rack Height: 4U
  • Processor Supported: 2x Intel E5-2600 v3/v4
  • Drive Bays: 24x 2.5" Hot-Swap
  • Supports up to 10x Double-Wide GPUs in a Single Root Complex
Contact sales for pricing
Exxact Tensor TS4-264563-AMB 4U 2x Intel Xeon processor server - AMBER Certified MD system
MPN: TS4-264563-AMB
  • Rack Height: 4U
  • Processor Supported: 2x Intel E5-2600 v3/v4
  • Drive Bays: 8x 3.5" Hot-Swap
  • Supports up to 4x Double-Wide GPUs
Contact sales for pricing
Exxact Tensor TS4-672511-AMB 4U 2x Intel Xeon processor server - AMBER Certified MD system
MPN: TS4-672511-AMB
  • Rack Height: 4U
  • Processor Supported: 2x Intel Xeon Scalable Family
  • Drive Bays: 8x 3.5" Hot-Swap
  • Supports up to 4x Double-Wide GPUs
Contact sales for pricing
Exxact Tensor TWS-1642706-AMB 1x Intel Core X-Series processor - AMBER Certified MD System
MPN: TWS-1642706-AMB
  • Form Factor: 4U Rackmountable / Tower
  • Processor: 1x Intel Core X-Series
  • Drive Bays: 8x 3.5" Hot-Swap
  • Supports up to 4x Double-Wide cards
Contact sales for pricing
Exxact Tensor TWS-1686525-AMB 2x Intel Xeon processor workstation - AMBER Certified MD system
MPN: TWS-1686525-AMB
  • Form Factor: 4U Rackmountable / Tower
  • Processor: 2x Intel Xeon Scalable family
  • Drive Bays: 4x 3.5"/2.5" Hot-Swap
  • Up to 5x Double-Wide cards
Contact sales for pricing
Exxact Tensor TWS-289061-AMB 2x Intel Xeon processor workstation - AMBER Certified MD system
MPN: TWS-289061-AMB
  • Form Factor: 4U Rackmountable / Tower
  • Processor: 2x Intel Xeon E5-2600 v3/v4
  • Drive Bays: 8x 3.5" Hot-Swap
  • Supports up to 4x Double-Wide cards
Contact sales for pricing
Exxact Tensor TWS-773645-AMB 2x Intel Xeon processor workstation - AMBER Certified MD system
MPN: TWS-773645-AMB
  • Form Factor: 4U Rackmountable / Tower
  • Processor: 2x Intel Xeon Scalable family
  • Drive Bays: 8x 3.5" Hot-Swap
  • Up to 4x Double-Wide cards
Contact sales for pricing
Exxact Valence VWS-1690441-AMB 1x Intel Xeon processor workstation - AMBER Certified MD system
MPN: VWS-1690441-AMB
  • Form Factor: Mid-Tower
  • Processor: 1x Intel Xeon processor W family
  • Drive Bays: 4x 3.5" Internal
  • Supports up to 2x Double-Wide cards
Contact sales for pricing
Exxact Valence VWS-264615-AMB 1x Intel Xeon processor workstation - AMBER Certified MD system
MPN: VWS-264615-AMB
  • Form Factor: Mid-Tower
  • Processor: 1x Intel Xeon E5-2600 v3/v4, Xeon E5-1600 v3/v4, Core i7
  • Drive Bays: 4x 3.5" Internal
  • Supports up to 2x Double-Wide cards
Contact sales for pricing