GPU Computing Info
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  Bio Workbench
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The NVIDIA® Tesla™ Bio Workbench enables biophysicists and computational chemists to push the boundaries of biochemical research. It turns a standard PC into a “computational laboratory” capable of running complex bioscience codes, in fields such as drug discovery and DNA sequencing, more than 10-20 times faster through the use of NVIDIA Tesla GPUs.
 
THE GPU TEST DRIVE
   
AMBER 11 GPU Test Drive- Reduce Simulation Time from Hours to Minutes
Attention AMBER users: AMBER 11 now supports multiple GPUs and it’s better than ever! And for a limited time, you can try out your models on GPUs for free.
Tesla MD SimCluster Test Drive
 
APPLICATIONS
Molecular Dynamics & Quantum Chemistry Bio Informatics
• ACE MD
AMBER
• BigDFT (ABINIT) (news)
• GROMACS
• HOOMD
LAMMPS
NAMD
TeraChem (Quantum Chemistry)
• VMD
• CUDA-BLASTP
• CUDA-EC
• CUDA-MEME
• CUDASW++ (Smith-Waterman)
• DNADist
• GPU Blast
• GPU-HMMER
• HEX Protein Docking
• Jacket (MATLAB Plugin)
• MUMmerGPU
• MUMmerGPU++
Complex molecular simulations that had been only possible using supercomputing resources can now be run on an individual workstation, optimizing the scientific workflow and accelerating the pace of research.
 
GPU SOLUTIONS
The Tesla Bio Workbench applications can be deployed on GPU-based desktop personal supercomputers or in data center solutions. Built on the revolutionary, massively parallel CUDA architecture, these solutions are designed to accelerate the pace of computational science and are available today!